Ashish V. Tendulkar > Research

Journal Papers

1Shivashankar, S., Srivathsan, S., Ravindran, B., Tendulkar, Ashish V. (2011) Multi-view methods for protein structure comparison using latent dirichlet allocation Bioinformatics 27(13):i61-i68
2Pankaj Gupta, Prabhat K. Singhal, Palakurthy Rajendrakumar, Yogendra Padwad, Ashish V. Tendulkar, V.S. Kalyanaraman, Reinhold E. Schmidt, A. Srinivasan, S. Mahalingam (2011) Mechanism of Host Cell MAPK/ERK-2 Incorporation into Lentivirus Particles: Characterization of the Interaction between MAPK/ERK-2 and Proline-Rich-Domain Containing Capsid Region of Structural Protein Gag Journal of Molecular Biology 410(4):681 - 697
3Rangrej, Aniket, Kulkarni, Sayali, Tendulkar, Ashish V. (2011) Comparative study of clustering techniques for short text documentsProceedings of the 20th international conference companion on World wide web WWW '11:111--112
4Tendulkar, Ashish, Wangikar, Pramod (2011) Characterization and sequence prediction of structural variations in alpha-helix BMC Bioinformatics 12(Suppl 1):S20
5Krallinger, Martin, Tendulkar, Ashish, Leitner, Florian, Chatr-aryamontri, Andrew, Valencia, Alfonso (2010) The PPI affix dictionary (PPIAD) and BioMethod Lexicon: importance of affixes and tags for recognition of entity mentions and experimental protein interactions BMC Bioinformatics 11(0):1-3
6Tendulkar, Ashish V., Krallinger, Martin, de la Torre, Victor, López, Gonzalo, Wangikar, Pramod P., Valencia, Alfonso (2010) FragKB: Structural and Literature Annotation Resource of Conserved Peptide Fragments and Residues PLoS ONE 5(3):e9679
7Krallinger, Martin, Rodriguez-Penagos, Carlos, Tendulkar, Ashish, Valencia, Alfonso (2009) PLAN2L: a web tool for integrated text mining and literature-based bioentity relation extraction Nucleic Acids Research 37(suppl 2):W160-W165
8Tendulkar, Ashish, Ogunnaike, Babatunde, Wangikar, Pramod (2007) Protein local conformations arise from a mixture of Gaussian distributions Journal of Biosciences 32(0):899-908
9Tendulkar, Ashish V., Sohoni, Milind A., Ogunnaike, Babatunde, Wangikar, Pramod P. (2005) A geometric invariant-based framework for the analysis of protein conformational space Bioinformatics 21(18):3622-3628
10Ashish V. Tendulkar, Anand A. Joshi, Milind A. Sohoni, Pramod P. Wangikar (2004) Clustering of Protein Structural Fragments Reveals Modular Building Block Approach of Nature Journal of Molecular Biology 338(3):611 - 629
11Ashish V. Tendulkar, Pramod P. Wangikar, Milind A. Sohoni, Vivekanand V. Samant, Chetan Y. Mone (2003) Parameterization and Classification of the Protein Universe via Geometric Techniques Journal of Molecular Biology 334(1):157 - 172
12Pramod P. Wangikar, Ashish V. Tendulkar, S. Ramya, Deepali N. Mali, Sunita Sarawagi (2003) Functional Sites in Protein Families Uncovered via an Objective and Automated Graph Theoretic Approach Journal of Molecular Biology 326(3):955 - 978

Peer-reviewed Conference Papers

1Shivashankar, S., Srivathsan, S., Ravindran, B., Tendulkar, Ashish V. (2011) Multi-view methods for protein structure comparison using latent dirichlet allocation Intelligent Systems in Molecular Biology/European Conference on Computational Biology (ISMB/ECCB) 27(13):i61-i68
2Rangrej, Aniket, Kulkarni, Sayali, Tendulkar, Ashish V. (2011) Comparative study of clustering techniques for short text documentsProceedings of the 20th international conference companion on World wide web WWW '11:111--112
3Tendulkar, Ashish, Wangikar, Pramod (2011) Characterization and sequence prediction of structural variations in alpha-helix Asia Pacific Bioinformatics Conference (APBC) 12(Suppl 1):S20
4Tendulkar, Ashish V, Ogunnaike, Babatunde, Wangikar, Pramod P (2006) Gaussian mixture modeling of alpha-helix subclasses: structure and sequence variations. Pacific Symposium On Biocomputing 302:291--302